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研究生: 謝承璋
Hsieh, Cheng-Chang
論文名稱: 基於光學相干斷層掃描血管造影視網膜圖像的視覺預測多流網路
Multi-Stream Networks for Visual Acuity Prediction based on Optical coherence tomography Angiography Retina Images
指導教授: 林政宏
Lin, Cheng-Hung
口試委員: 賴穎暉 謝易庭 林政宏
口試日期: 2021/09/09
學位類別: 碩士
Master
系所名稱: 電機工程學系
Department of Electrical Engineering
論文出版年: 2021
畢業學年度: 109
語文別: 中文
論文頁數: 41
中文關鍵詞: 視網膜前膜光學相干斷層掃描光學相干斷層掃描血管成像術眼底螢光血管攝影深度神經網路多流網路視力偵測
英文關鍵詞: deep learning, multi-stream network, visual acuity, Epiretinal membranes, optical coherence tomography, optical coherence tomography angiography, fundus fluorescence angiography
研究方法: 實驗設計法
DOI URL: http://doi.org/10.6345/NTNU202101411
論文種類: 學術論文
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  • 視網膜前膜(Epiretinal Membrane,ERM)是一種慢性眼疾,肇因於視網膜的表面出現微細缺口,導致黃斑部增生一層纖維薄膜而影響視力。黃斑前膜手術為最典型治療方法,惟部分患者在手術後的視力恢復效果不佳,重要的因素之一是缺乏執行內限界膜(Inner Limiting Membrane,ILM)剝離時機的判斷,而此診斷障礙乃因為缺乏判斷黃斑前膜是否影響視力的標準,而導致醫生無法做出診斷,並於早期進行內限界膜剝離手術以提升術後的視力恢復。

    為了解決這個問題,本論文提出多種多流(multi-stream)神經網路,透過光學共輒斷層掃描(optical coherence tomography,OCT)、非侵入性光學共輒斷層血管掃描 (optical coherence tomography angiography,OCTA)、眼底螢光血管攝影(fundus fluorescence angiography,FFA)進行視力預測。我們收集454位患者上述三種影像並標記其視力資訊以訓練我們提出的多流神經網路,並以不同的影像輸入測試網路的效能。實驗結果顯示透過FFA全層、淺層、深層等三種影像在黃斑前膜患者的視力診斷中達到90.19%的準確性。最後,我們利用梯度權重類別活化映射(gradient-weighted class activation map,Grad-CAM) 可視化視力在OCT、 OCTA和FFA之間的特徵,幫助醫生進行診斷。

    Epiretinal Membrane (ERM) is a chronic eye disease. It is caused by tiny gaps on the surface of the retina, causing a fibrous membrane to proliferate in the macula, which affects vision. Macular epithelial membrane surgery is the most typical treatment method, but some patients have poor vision recovery after surgery. One of the important factors is the lack of judgment on the timing of performing Inner Limiting Membrane (ILM) peeling. This problem is due to the lack of criteria for judging how ERM will affect the visual acuity, which causes doctors cannot make the diagnosis to perform ILM peeling in early time to improve postoperative vision recovery.
    In order to solve this problem, this paper proposes a variety of multi-stream neural networks to find the correlation among visual acuity and optical coherence tomography (OCT), optical coherence tomography angiography (OCTA), fundus fluorescence angiography (FFA) images in ERMs patients. We collect the above three images of 454 patients and label their vision information to train our proposed multi-stream neural network, and then input different images to test the performance of the network. Experimental results show that by using three images of FFA full-thickness, superficial layer, and deep layer, the accuracy of the vision prediction of patients with epidermal membrane can reach 90.19%.
    Finally, we apply gradient-weighted class activation map (Grad-CAM) to visualize the characteristics of vision among OCT, OCTA, and FFA to help doctors make a diagnosis.

    誌 謝 i 摘要 ii Abstract iii 目 錄 v 圖目錄 vii 表目錄 viii 第一章 緒論 1 1.1 研究背景與動機 1 1.2 研究目的 3 1.3 研究方法概述 3 1.4 研究貢獻 5 1.5 論文架構 5 第二章 文獻探討 7 2.1 Deep learning with FFA, OCTA, OCT images 7 2.2 Fine-grained classification 8 2.3 Two-stream model for action recognition 9 2.4 Medical image visualization 9 第三章 研究方法 11 3.1 模型流程和資料預處理 11 3.2 多流架構與融合機制 12 3.3 融合方式與模型訓練 14 3.4 模型交叉驗證 16 3.5 API-Net改良 16 第四章 實驗結果 18 4.1實驗配置 18 4.1.1資料集 18 4.1.2資料強化 20 4.1.3訓練細節 21 4.2多流網路架構驗證 22 4.3融合實驗 22 4.3.1雙流模型 23 4.3.2三流模型 25 4.3.3四流模型 26 4.4 可視化 28 4.5比較與實驗結論 32 4.6 10-fold cross validation 32 第五章 結論與未來展望 35 5.1 結論 35 5.2 未來展望 35 參 考 文 獻 36 自傳 39

    [1] Xiao W, Chen X, Yan W, Zhu Z, He M. Prevalence and risk factors of epiretinal membranes: a systematic review and meta-analysis of population-based studies. BMJ open. 2017;7(9):e014644.
    [2] Sandali O, El Sanharawi M, Basli E, et al. Epiretinal membrane recurrence: incidence, characteristics, evolution, and preventive and risk factors. Retina (Philadelphia, Pa). 2013;33(10):2032-2038.
    [3] Novotny HR, Alvis DL. A method of photographing fluorescence in circulating blood in the human retina. Circulation. 1961;24:82-86.
    [4] Huang D, Swanson EA, Lin CP, et al. Optical coherence tomography. science. 1991;254(5035):1178-1181.
    [5] De Carlo TE, Romano A, Waheed NK, Duker JS. A review of optical coherence tomography angiography (OCTA). International journal of retina and vitreous. 2015;1(1):5.
    [6] Suh MH, Seo JM, Park KH, Yu HG. Associations between macular findings by optical coherence tomography and visual outcomes after epiretinal membrane removal. American journal of ophthalmology. 2009;147(3):473-480. e473.
    [7] Semeraro F, Morescalchi F, Duse S, Gambicorti E, Russo A, Costagliola C. Current trends about inner limiting membrane peeling in surgery for epiretinal membranes. Journal of ophthalmology. 2015;2015.
    [8] Xiao W, Chen X, Yan W, Zhu Z, He M. Prevalence and risk factors of epiretinal membranes: a systematic review and meta-analysis of population-based studies. BMJ open. 2017;7(9): e014644-e014644.
    [9] Stevenson W, Prospero Ponce CM, Agarwal DR, Gelman R, Christoforidis JB. Epiretinal membrane: optical coherence tomography-based diagnosis and classification. Clin Ophthalmol. 2016; 10:527-534.
    [10] Akil H, Huang AS, Francis BA, Sadda SR, Chopra V. Retinal vessel density from optical coherence tomography angiography to differentiate early glaucoma, pre-perimetric glaucoma and normal eyes. PloS one. 2017;12(2).
    [11] Ramprasaath R. Selvaraju, Michael Cogswell, Abhishek Das, Ramakrishna Vedantam, Devi Parikh, Dhruv Batra. Grad-CAM: Visual Explanations from Deep Networks via Gradient-based Localization. arXiv:1610.02391, 2016.
    [12] LeCun Y, Bengio Y, Hinton G. Deep learning. Nature. 2015;521(7553):436-444.
    [13] Z. Zhao, P. Zheng, S. Xu, and X. Wu, “Object detection with deep learning: A review,” IEEE Trans. on Neur. Net. and Learn. Syst., vol. 30, pp. 3212–3232, 2019.
    [14] Varga A, Steeneken HJ. Assessment for automatic speech recognition: II. NOISEX-92: A database and an experiment to study the effect of additive noise on speech recognition systems. Speech communication. 1993;12(3):247-251.
    [15] Lai Y-H, Tsao Y, Lu X, et al. Deep learning–based noise reduction approach to improve speech intelligibility for cochlear implant recipients. Ear and hearing. 2018;39(4):795-809.
    [16] Michael S. Ryoo, AJ Piergiovanni, Juhana Kangaspunta, Anelia Angelova. AssembleNet++: Assembling Modality Representations via Attention Connections. arXiv:2008.08072, 2020.
    [17] Shen D, Wu G, Suk H-I. Deep learning in medical image analysis. Annual review of biomedical engineering. 2017; 19:221-248.
    [18] Parmita M, Aaron L, Cecilia L, Magdalena B, Ariel R. Multilabel multiclass classification of OCT images augmented with age, gender and visual acuity data. bioRxiv. 2018.
    [19] Kang, Eugene Yu-Chuan et al. “Deep Learning-Based Detection of Early Renal Function Impairment Using Retinal Fundus Images: Model Development and Validation.” JMIR medical informatics vol. 8,11 e23472. 26 Nov. 2020, doi:10.2196/23472
    [20] Yim, J., Chopra, R., Spitz, T. et al. Predicting conversion to wet age-related macular degeneration using deep learning. Nat Med 26, 892–899 (2020).
    [21] Michael G. Kawczynski, Thomas Bengtsson, Jian Dai, J. Jill Hopkins, Simon S. Gao, Jeffrey R. Willis; Development of Deep Learning Models to Predict Best-Corrected Visual Acuity from Optical Coherence Tomography. Trans. Vis. Sci. Tech. 2020;9(2):51.
    [22] Yu-Yi Lin , Bo-Sin Wang , Yi-Ting Hsieh , Chung-Yen Su. A Deep Learning Approach to Predict the Visual Acuity for Epiretinal Membranes Patients based on the Optical Coherence Tomography Images
    [23] Tao Hu, Honggang Qi, Qingming Huang, Yan Lu. See Better Before Looking Closer: Weakly Supervised Data Augmentation Network for Fine-Grained Visual Classification. arXiv:1901.09891,2019.
    [24] Fan Zhang, Meng Li, Guisheng Zhai, Yizhao Liu. Multi-branch and Multi-scale Attention Learning for Fine-Grained Visual Categorization. arXiv:2003.09150, 2020.
    [25] Peiqin Zhuang, Yali Wang, Yu Qiao. Learning Attentive Pairwise Interaction for Fine-Grained Classification. arXiv:2002.10191, 2020.
    [26] Simonyan, K. and Zisserman, A. Two-stream convolutional networks for action recognition in videos. CoRR, abs/1406.2199, 2014. Published in Proc. NIPS, 2014.
    [27] Christoph F, Axel P, Andrew Z. Convolutional Two-Stream Network Fusion for Video Action Recognition. arXiv:1406.2199,2014.
    [28] Park, J.J., Kim, K.A., Nam, Y. et al. Convolutional-neural-network-based diagnosis of appendicitis via CT scans in patients with acute abdominal pain presenting in the emergency department. Sci Rep 10, 9556 (2020).
    [29] Panwar, Harsh et al. “A deep learning and grad-CAM based color visualization approach for fast detection of COVID-19 cases using chest X-ray and CT-Scan images.” Chaos, solitons, and fractals vol. 140 (2020): 110190.
    [30] Kaiming He, Xiangyu Zhang, Shaoqing Ren, Jian Sun. Deep Residual Learning for Image Recognition. arXiv:1512.03385, 2015.
    [31] Max Jaderberg, Karen Simonyan, Andrew Zisserman, Koray Kavukcuoglu. Spatial Transformer Networks. arXiv:1506.02025, 2015.
    [32] Ekin D. Cubuk, Barret Zoph, Jonathon Shlens, Quoc V. Le. RandAugment: Practical automated data augmentation with a reduced search space. arXiv:1909.13719, 2019
    [33] Priya Goyal, Piotr Dollár, Ross Girshick, Pieter Noordhuis, Lukasz Wesolowski, Aapo Kyrola, Andrew Tulloch, Yangqing Jia, Kaiming He. Accurate, Large Minibatch SGD: Training ImageNet in 1 Hour. arXiv:1706.02677, 2017.

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